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Family Variant Testing

A targeted test to identify specific variants previously identified in a family member, with comprehensive gene evaluation powered by the Helix Exome+® platform.

Turnaround

6-21 days

Requery (SOQO)

≤ 5 days

Genes Tested

242

Panel Description

Helix Family Variant Testing is a targeted test to identify the presence or absence of one or more specific variants previously identified as being present in a family member. The entire gene will be evaluated and therefore additional variants determined to be pathogenic or likely pathogenic within the gene ordered will also be included in the report. Variants of uncertain significance (VUS) will not be included except in cases where the variant specified in the order is determined to be a VUS. A separate order is required for variants in separate genes.

Order This Test

Contact our clinical team to order this panel or learn more.

(855) 699-1933
clinicalsupport@helix.com

Indications for Testing

A family member of a proband who has received a genetic test result with a pathogenic or likely pathogenic variant.

Methodology

This test utilizes next-generation sequencing to detect single nucleotide variants, insertions and deletions up to 20 bp, and copy number variants.

Technical Specifications

Analytical sensitivity (SNV)

> 99%

Analytical sensitivity (indel)

> 99%

Analytical specificity

> 99%

CNV sensitivity (multi-exon)

> 99%

CNV sensitivity (single-exon)

> 90%

Gene notes

N/A - Gene-specific notes vary based on the ordered gene.

Genomic build

GRCh38

Genes Tested

242 genes included in this panel

ABCA1ABCC9ABCD1ABCG5ABCG8ACAD9ACADVLACTA2ACTC1ACTN2ACVRL1ADAMTS10AGLAIPALKALMS1ALPK3ANGPTL3ANK2APCAPOA1APOA5APOBAPOC2ATMATP7BAXIN2BAG3BAP1BARD1BGNBLMBMP10BMPR1ABRAFBRCA1BRCA2BRIP1BTDCACNA1CCACNA1DCACNA1SCALM1CALM2CALM3CASQ2CAV3CBSCDC73CDH1CDH2CDK4CDKN1BCDKN2ACETPCHEK2COL3A1COL5A1COL5A2CPT2CREB3L3CRYABCSRP3CTNNA1CYP27A1DESDICER1DMDDNAJC19DOLKDSC2DSG2DSPDTNAEFEMP2EGFRELAC2EMDENGEPCAMF2F5FBN1FBN2FHFHL1FKRPFKTNFLCNFLNAFLNCFOXE3GAAGLAGPD1GPIHBP1GREM1HCN4HFEHNF1AHOXB13HRASJPH2JUPKCNE1KCNE2KCNH2KCNJ2KCNQ1KITKRASLAMP2LCATLDLRLDLRAP1LIPALIPGLMF1LMNALOXLPLLRP6LZTR1MAP2K1MAP2K2MAXMBD4MED12MEN1METMFAP5MITFMLH1MRASMSH2MSH3MSH6MTO1MTTPMUTYHMYBPC3MYH11MYH7MYL2MYL3MYL4MYLKMYLK3MYPNNEXNNF1NF2NKX2-5NOTCH1NRASNTHL1OTCPALB2PCCAPCCBPCSK9PDGFRAPKP2PLNPLOD1PMS2PNPLA2POLD1POLEPOT1PPA2PPARGPPCSPRDM16PRKAG2PRKAR1APRKG1PTCH1PTENPTPN11RAD51CRAD51DRAF1RB1RBM20RETRIT1RPE65RYR1RYR2SAR1BSCN5ASDHASDHAF2SDHBSDHCSDHDSERPINA1SGCDSHOC2SKISLC22A5SLC2A10SLC4A3SMAD2SMAD3SMAD4SMARCA4SMARCB1SMARCE1SOS1SOS2STAC3STK11SUFUSYNE2TAFAZZINTBX20TCAPTECRLTGFB2TGFB3TGFBR1TGFBR2TMEM127TMEM43TMEM70TNNC1TNNI3TNNI3KTNNT2TP53TPM1TRDNTRIM63TSC1TSC2TTNTTRVCLVHLWT1

Ordering Information

Turnaround Time

Typically 6-21 days (standard), Typically ≤ 5 days (requery)

Preferred Specimen

BD Vacutainer Whole Blood K2 EDTA Collection Tube 4mL or Oragene Dx Saliva Collection Kit

Shipping Instructions

Specimens to arrive at Helix within 96 hours of collection at ambient temperature.

Clinical Description

Helix Family Variant Testing is a targeted test to identify the presence or absence of one or more specific variants previously identified as being present in a family member. The entire gene will be evaluated and therefore additional variants determined to be pathogenic or likely pathogenic within the gene ordered will also be included in the report. Variants of uncertain significance (VUS) will not be included except in cases where the variant specified in the order is determined to be a VUS. A separate order is required for variants in separate genes.

Ready to order this test?

Contact our clinical team to order the Family Variant Testing for your patients.